Release notes: Kaviar public release build 160204-Public This build contains 161,647,847 SNVs and 49,869,930 indels/substitutions. These include 136,328,887 SNVs and 10,796,482 indels/subsitutions from release 146 of dbSNP. Issues addressed since previous release --------------------------------------- o The data source UK10K included duplicate entries for many variants. This caused inflated values for AC and AF for many Kaviar variants seen in UK10K data. These duplicates ahve been filtered out. o Inova CGI indels no longer have an extra reference base prepended. o The number of entries where the sum of MAF values is greater than 1 is greatly reduced, to 211 entries. Other changes ------------- o Support for hg18 has been discontinued
Please also see Kaviar's known issues page.